Error Initializing RepositoryIndexManager (java.lang.AssertionError: data were not fully read, check your serializer)
I am on a project that is using ModeShape. When I run tests locally on OS X 10.10.3 I am getting the below errors when the JcrRepository, and specifically the RepositoryIndexManager, is started. Also below is the repository configuration file we are using. We are using ModeShape 4.3.0.Final, Infinispan 6.0.2.Final, and MapDB 1.0.6.
Has anyone seen this error or have any ideas?
Many thanks!
SLF4J implementation located in the classpath. It will be used by ModeShape for logging.
ModeShape version 4.3.0.Final
ISPN000128: Infinispan version: Infinispan 'Hoptimus Prime' 7.2.0.Final
ISPN000104: Falling back to DummyTransactionManager from Infinispan
Jun 23, 2015 2:36:56 PM org.komodo.utils.KLog$BasicLogger error
SEVERE: Error starting engine
Jun 23, 2015 2:36:56 PM org.komodo.utils.KLog$BasicLogger error
SEVERE: An exception occurred in the local repository.
java.lang.RuntimeException: java.lang.RuntimeException: java.lang.AssertionError: data were not fully read, check your serializer
at org.komodo.repository.LocalRepository$1.errorOccurred(LocalRepository.java:446)
at org.komodo.repository.internal.ModeshapeEngineThread.errorCallback(ModeshapeEngineThread.java:245)
at org.komodo.repository.internal.ModeshapeEngineThread.startEngine(ModeshapeEngineThread.java:509)
at org.komodo.repository.internal.ModeshapeEngineThread.run(ModeshapeEngineThread.java:625)
Caused by: java.lang.RuntimeException: java.lang.AssertionError: data were not fully read, check your serializer
at org.modeshape.jcr.JcrRepository$RunningState.completeInitialization(JcrRepository.java:1341)
at org.modeshape.jcr.JcrRepository.doStart(JcrRepository.java:390)
at org.modeshape.jcr.JcrRepository.getStartupProblems(JcrRepository.java:297)
at org.komodo.repository.internal.ModeshapeEngineThread.startEngine(ModeshapeEngineThread.java:483)
... 1 more
Caused by: java.lang.AssertionError: data were not fully read, check your serializer
at org.mapdb.Store.deserialize(Store.java:299)
at org.mapdb.StoreDirect.get2(StoreDirect.java:475)
at org.mapdb.StoreWAL.get2(StoreWAL.java:368)
at org.mapdb.StoreWAL.get(StoreWAL.java:352)
at org.mapdb.Caches$HashTable.get(Caches.java:245)
at org.mapdb.BTreeMap.<init>(BTreeMap.java:541)
at org.mapdb.DB.getTreeSet(DB.java:997)
at org.mapdb.DB.get(DB.java:1424)
at org.mapdb.DB.getAll(DB.java:1497)
at org.modeshape.jcr.index.local.LocalEnumeratedIndex.<init>(LocalEnumeratedIndex.java:83)
at org.modeshape.jcr.index.local.LocalEnumeratedIndex.create(LocalEnumeratedIndex.java:55)
at org.modeshape.jcr.index.local.ManagedLocalIndexBuilder$SingleColumnIndexBuilder.build(ManagedLocalIndexBuilder.java:423)
at org.modeshape.jcr.index.local.LocalIndexProvider.createIndex(LocalIndexProvider.java:211)
at org.modeshape.jcr.spi.index.provider.IndexProvider.notify(IndexProvider.java:690)
at org.modeshape.jcr.RepositoryIndexManager.initialize(RepositoryIndexManager.java:188)
at org.modeshape.jcr.RepositoryQueryManager.initialize(RepositoryQueryManager.java:94)
at org.modeshape.jcr.JcrRepository$RunningState.completeInitialization(JcrRepository.java:1320)
... 4 more
Here is the repository config file:
{
"name" : "Komodo Local Repository",
"jndiName" : "jcr/KomodoLocalRepository",
"monitoring" : {
"enabled" : true
},
"node-types" :
[
"config/xmi.cnd",
"config/med.cnd",
"config/mmcore.cnd",
"config/vdb.cnd",
"config/TeiidSql.cnd",
"config/komodo.cnd"
],
"workspaces" : {
"default" : "komodoLocalWorkspace",
"allowCreation" : true,
"initialContent" : {
"*" : "initialContent.xml"
}
},
"storage" : {
"cacheConfiguration" : "org/komodo/repository/local-repository-infinispan-config.xml",
"cacheName" : "Komodo Cache",
"binaryStorage" : {
"minimumBinarySizeInBytes" : 4096,
"minimumStringSize" : 4096,
"directory": "${user.home}/.komodo/storage/content/binaries",
"type" : "file"
}
},
"indexProviders" : {
"local" : {
"classname" : "org.modeshape.jcr.index.local.LocalIndexProvider",
"directory" : "${user.home}/.komodo/indexes"
}
},
"indexes" : {
"nodesByLocalName" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "nt:unstructured",
"columns" : "mode:localName(STRING)",
"workspaces" : "*"
},
"nodesByPath" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "nt:unstructured",
"columns" : "jcr:path(PATH)",
"workspaces" : "*"
},
"nodesByType" : {
"kind" : "Nodetype",
"provider" : "local",
"synchronous" : true,
"nodeType" : "nt:unstructured",
"workspaces" : "*",
"columns" : "mode:localName(STRING)"
},
"vdbsByVersion" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "vdb:virtualDatabase",
"workspaces" : "*",
"columns" : "vdb:version(LONG)"
},
"kSchemaByRendition" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "tko:schema",
"workspaces" : "*",
"columns" : "tko:rendition(STRING)"
},
"ddlTableStmtByQuery" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "teiidddl:createTable",
"workspaces" : "*",
"columns" : "teiidddl:queryExpression(STRING)"
},
"ddlViewStmtByQuery" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "teiidddl:createView",
"workspaces" : "*",
"columns" : "teiidddl:queryExpression(STRING)"
},
"ddlProcStmtByQuery" : {
"kind" : "value",
"provider" : "local",
"synchronous" : true,
"nodeType" : "teiidddl:createProcedure",
"workspaces" : "*",
"columns" : "teiidddl:statement(STRING)"
}
},
"sequencing" : {
"removeDerivedContentWithOriginal" : true,
"threadPool" : "modeshape-workers",
"sequencers" : {
"VDB Dynamic Sequencer" : {
"classname" : "org.modeshape.sequencer.teiid.VdbDynamicSequencer"
},
"DDL Sequencer" : {
"classname" : "org.komodo.modeshape.lib.sequencer.KDdlSequencer"
},
"Teiid SQL Sequencer" : {
"classname" : "org.komodo.modeshape.teiid.TeiidSqlSequencer"
}
}
}}
